University of Heidelberg

Crystallization Facility

Structure Gallery

Here we present some of the protein structures recently elucidated using crystals grown at our protein crystallization platform:


Structure of fungal tRNA ligase Trl1 with RNA reveals conserved substrate-binding principles

 

Koehler et al. (2025)

Nat Struct Mol Biol

 

pdb entries: 8RBJ





Strand-Swapped SH3 Domain Dimer with Superoxide Dismutase Activity

 

Haege, Schwan et al. (2025)

ACS Cent Sci. 11 157-166

 

pdb entries: 9GGO





Structural and mechanistic insights into activation of human RNA ligase RTCB by Archease.

 

Gerber et al. (2024)

Nat Commun 15 2378

 

pdb entries: 8BTT 8BTX 8ODO 8ODP





Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.

 

Klein et al. (2024)

Nat Commun 15 716

 

pdb entries: 8ONX





Structural basis for binding of Drosophila Smaug to the GPCR Smoothened and to the germline inducer Oskar.

 

Kubikova et al. (2023)

PNAS 120 e2304385120

 

pdb entries: 8OIJ 8OIK




Mechanistic insights into RNA surveillance by the canonical poly(A) polymerase Pla1 of the MTREC complex.

 

Soni et al. (2023)

Nat Commun. 14 772

 

pdb entries: 7Q72 7Q73 7Q74



Structural and functional characterization of the N-terminal acetyltransferase Naa50.

 

Weidenhausen et al. (2021)

Structure 29 413-425

 

pdb entries: 6YZZ 6Z00



Structural basis of Naa20 activity towards a canonical NatB substrate.

 

Layer et al. (2021)

Commun Biol 4 2

 

pdb entries: 6ZMP



Nanobody-Mediated Neutralization Reveals an Achilles Heel for Norovirus.

 

Koromyslova et al. (2020)

J Virol. 94 e00660-20

 

pdb entries: 6XW4 6XW5 6XW6 6XW7



Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL.

 

Sloan et al. (2020)

Nat Commun. 11 2223

 

pdb entries: 6RY3 6RYD 6RYI 6RYL



The Arabidopsis Nα-acetyltransferase NAA60 locates to the plasma membrane and is vital for the high salt stress response.

 

Linster, Layer et al. (2020)

New Phytol. 228 554-569

 

pdb entries: 6TGX 6TH0



The ribosome-associated complex RAC serves in a relay that directs nascent chains to Ssb.

 

Zhang, Gese et al. (2020)

Nat Commun. 11 1504

 

pdb entries: 6SR6



Structural Basis of Nanobodies Targeting the Prototype Norovirus.

 

Ruoff et al. (2019)

J Virol. 93 e02005-18

 

pdb entries: 6H6Y 6H6Z 6H70 6H71 6H72



Structural analysis of a replication protein encoded by a plasmid isolated from a multiple sclerosis patient.

 

Kilic et al. (2019)

Acta Cryst. D75 498-507

 

pdb entries: 6H24



DENR–MCTS1 heterodimerization and tRNA recruitment are required for translation reinitiation.

 

Ahmed et al. (2018)

PLOS Biol 16 e2005160

 

pdb entries: 5ONS



Atomic Structure of the Murine Norovirus Protruding Domain and Soluble CD300lf Receptor Complex.

 

Kilic et al. (2018)

J Virol. 92 e00413-18

 

pdb entries: 5OR7



Molecular Mechanism of J-Domain-Triggered ATP Hydrolysis by Hsp70 Chaperones.

 

Kityk et al. (2018)

Mol Cell 69 227-237

 

pdb entries: 5NRO



Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.

 

Kater et al. (2017)

Cell 171 1599-1610

 

pdb entries: 6EMF, 6EMG



Structure of Naa15/Naa10 bound to HypK-THB.

 

Weyer et al. (2017)

Nat Commun. 8 15726

 

pdb entries: 5NNP, 5NNR



9 angstrom structure of the COPI coat reveals that the Arf1 GTPase occupies two contrasting molecular environments.

 

Dodonova et al. (2017)

Elife 6 e26691

 

pdb entries: 5MU7



Lysine relay mechanism coordinates intermediate transfer in vitamin B6 biosynthesis.

 

Rodrigues et al. (2017)

Nat Chem Biol. 13 290-294

 

pdb entries: 5LNS, 5LNT, 5LNU, 5LNV, 5LNW, 5LNR



Structural insights into a unique Hsp70-Hsp40 interaction in the eukaryotic ribosome-associated complex.

 

Weyer et al. (2017)

Nat Struct Mol Biol. 24 144-151

 

pdb entries: 5MB9



Interaction of the cotranslational Hsp70 Ssb with ribosomal proteins and rRNA depends on its lid domain.

 

Gumiero et al. (2016)

Nat Commun. 7 13563

 

pdb entries: 5TKY



Structural analysis of bovine norovirus protruding domain.

 

Singh et al. (2016)

Virology 487 296-301

 

pdb entries: 5E6T



Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.

 

Horn et al. (2015)

Nat Commun. 6 8875

 

pdb entries: 5E4W, 5E4X, 2N88



Plasmodium falciparum antioxidant protein reveals a novel mechanism for balancing turnover and inactivation of peroxiredoxins.

 

Staudacher et al. (2015)

Free Radic Biol Med. 85 228-236

 

pdb entries: 4D73



Symportin 1 chaperones 5S RNP assembly during ribosome biogenesis by occupying an essential rRNA-binding site.

 

Calvino et al. (2015)

Nat Commun. 6 6510

 

pdb entries: 5AFF



Structure of the complete bacterial SRP Alu domain.

 

Kempf et al. (2014)

Nucleic Acids Res. 42 12284-12294

 

pdb entries: 4WFL and 4WFM



SRP RNA remodeling by SRP68 explains its role in protein translocation.

 

Grotwinkel et al. (2014)

Science 344 101-104

 

pdb entries: 4P3F



Structural characterization of a eukaryotic chaperone--the ribosome-associated complex.

 

Leidig et al. (2013)

Nat. Struct. Mol. Biol. 20 23-28

 

pdb entry: 4GNI and 4GMQ



Structure and dynamics of the ATP-bound open conformation of Hsp70 chaperones.

 

Kityk et al. (2012)

Mol. Cell 48 863-874

 

pdb entries: 4B9Q



Synchronizing nuclear import of ribosomal proteins with ribosome assembly.

 

Kressler et al. (2012)

Science 338 666-671

 

pdb entries: 4GMN ,4GMO



Structural basis for tail-anchored membrane protein biogenesis by the Get3-receptor complex.

 

Stefer et al. (2011)

Science 333 758-762

 

pdb entries: 3SJA, 3SJB, 3SJC, 3SJD